MassBank Software & Data

Software that MassBank Project offers, and download of MassBank Data.

MassBank System Installer

Massbank system can be installed in Windows OS or Linux OS.
Refer to the Manuals. Manuals [Part 2. Setup of Data Server]

Data Backup Tool

Data Backup Tool is a tool for backing up all the data that is registered with the database built with MassBank system installer.
Refer to the Manuals. Manuals [Part 6. For Advanced Users]

Record Editor

Record Editor is a tool for creating and editing MassBank record files.
Refer to the Manuals. Manuals [Part 3. Setup of Client PC]

Download of MassBank Data

Copy of the current data on MassBank is available now !
Downloadable data are those that show Creative Commons Licenses ( under the “LICENSE” tag on each record.   Each record displays a different CC license.   The records downloaded should be used under the terms of the licenses because there are some restrictions with respect to using them in a commercial manner and/or with modifications.   Molfiles are not included in the copy. When you try to upload your copy to the local MassBank system on your PC, you will be requested to provide a molfile to each record.  
Refer to the Manuals. Manuals [Download of MassBank Data]

MassBank Developers

WEB-API (SOAP) client example package can be downloaded.

The example program (batch search and highliting the results in KEGG pathway) using WEB-API (SOAP) can be downloaded.

All source codes used with the MassBank system have been opened to the public with

Mass++ Software

Software that Koichi Tanaka Laboratory of Advanced Science and Technology offers.

Mass++ System Installer

Mass++ is free software that can analyze data acquired from various mass spectrometry devices. Mass++ is a software for mass spectrometer.

RMassBank Software Package

Software package that Eawag offers.

RMassBank Package (Main)

Workflow to process tandem MS files and build MassBank records. Functions include automated extraction of tandem MS spectra, formula assignment to tandem MS fragments, recalibration of tandem MS spectra with assigned fragments, spectrum cleanup, automated retrieval of compound information from Internet databases, and export to MassBank records.

RMassBank Package (Sample Data)

Example spectra, a example compound list and an example annotation list for a narcotics dataset; required to test RMassBank.

FUJITSU ACD/Labs Software

Software that FUJITSU Ltd. offers.

Macro of ACD/MS Manager

Macro for Generating a MassBank query file.

  Technical Computing Solutions Unit, Computational Science & Engineering Solution Div. FUJITSU LIMITED
  TEL : +81-43-299-3680
  FAX : +81-43-299-3011
  Mail :
  URL : Site of FUJITSU   Site of ACD/Labs

Other Software

The following software is used with MassBank.

Java (JRE - Java Runtime Environment)

Java is necessary in MassBank service.

Adobe Reader

Adobe Reader is necessary in MassBank documents and manuals (PDF).

PowerPoint Viewer

PowerPoint Viewer is necessary in MassBank documents (Microsoft Office PowerPoint).